BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB011C08SP1|AL426185
(783 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1117 1518 0.0
>3x_Contig1117
Length = 4940
Score = 1518 bits (761), Expect = 0.0
Identities = 775/783 (98%), Gaps = 1/783 (0%)
Strand = Plus / Plus
Query: 1 attggtttccccttttcttacctttattcttatatcattttcggatcttctttttgtttt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2698 attggtttccccttttcttacctttattcttatatcattttcggatcttctttttgtttt 2757
Query: 61 ctactactattcaatctttttttacaatgggtactactattatatggcttccattcaaca 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2758 ctactactattcaatctttttttacaatgggtactactattatatggcttccattcaaca 2817
Query: 121 attccagccgaatcagagtgcttgtatgacagcatatcatgacattcgacaatccacgat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2818 attccagccgaatcagagtgcttgtatgacagcatatcatgacattcgacaatccacgat 2877
Query: 181 attattttattttwagataagtatatatgtatctytctgtatcttatgtatttaatgtgg 240
||||||||||||| |||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 2878 attattttattttaagataagtatatatgtatctctctgtatcttatgtatttaatgtgg 2937
Query: 241 cgcgcgttcatccttacgcagcgactgttgagtatcactaaatagcagaaagatattctt 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2938 cgcgcgttcatccttacgcagcgactgttgagtatcactaaatagcagaaagatattctt 2997
Query: 301 ttgtttttggaacagaatgatataatctacttcgtcacatgactacctctatcttgcttt 360
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 2998 ttgtttttggaacagaatgatataatcta-ttcgtcacatgactacctctatcttgcttt 3056
Query: 361 atcctgtcttctcttccgtcggtcctttaatcggtcttctccgaatcatactaacctttt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3057 atcctgtcttctcttccgtcggtcctttaatcggtcttctccgaatcatactaacctttt 3116
Query: 421 tttcttgatccgattgcgctccaatattaagaaaagaccgaaagactcatttaaatgtgg 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3117 tttcttgatccgattgcgctccaatattaagaaaagaccgaaagactcatttaaatgtgg 3176
Query: 481 aacagttaaaawagtctcttttgagcaagtygctttaaagttttgccaggcaagaggcaa 540
||||||||||| |||||||||||||||||| |||||||||||||||||||||||||||||
Sbjct: 3177 aacagttaaaaaagtctcttttgagcaagtcgctttaaagttttgccaggcaagaggcaa 3236
Query: 541 agaaatataactwataacagaagccgttataccaactaagttagatagattgtcaaagcg 600
|||||||||||| |||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3237 agaaatataactaataacagaagccgttataccaactaagttagatagattgtcaaagcg 3296
Query: 601 gatcaagcaagagttgggcaaaawaaaatagacttaagcataaagactcatagaacccca 660
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 3297 gatcaagcaagagttgggcaaaaaaaaatagacttaagcataaagactcatagaacccca 3356
Query: 661 gawaataaaacaaaaaagccatgtcagatttattattaattccaggtccaattatggtgt 720
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3357 gaaaataaaacaaaaaagccatgtcagatttattattaattccaggtccaattatggtgt 3416
Query: 721 cttcggctgtcgaggaagccgccagcattcaatcgttggctcatacctctccagaatttg 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 3417 cttcggctgtcgaggaagccgccagcattcaatcgttggctcatacctctccagaatttg 3476
Query: 781 tta 783
|||
Sbjct: 3477 tta 3479
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6397
Number of Sequences: 1807
Number of extensions: 6397
Number of successful extensions: 44
Number of sequences better than 1.0e-20: 1
length of query: 783
length of database: 10,358,551
effective HSP length: 16
effective length of query: 767
effective length of database: 10,329,639
effective search space: 7922833113
effective search space used: 7922833113
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.2 bits)